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Linea proposta per un Istituto di Biomedicina Gerontologica
L'approccio piu` efficiente per sviluppare SENS sarebbe un
"Manhattan Project" coordinato con fondi sostanziali prestabiliti in
modo appropriato e sistematico. Questo sara` ottenuto piu` facilmente
installando un istituto di ricerca. Questa pagina comprende la mia visione
corrente di come questo istituto potrebbe operare, poiche` rappresenta il
miglior uso di un miliardo di dollari e quale progetto principale dovrebbe
principalmente supervisionare.
Ho provato a scrivere questo
progetto, in una forma che potrebbe essere mostrata a persone potenzialmente
interessate a provvedere tale capitale (o buona parte di esso) nello
spazio di dieci anni. Se tu conosci tale persona, ti prego di segnalarle questo
progetto.
Sommario
Quale scienza sarebbe beneficiata?
Prevenendo
mutazioni mitocondriali
Degradando roba intracellulare
Prevenendo e curando il cancro
Rimuovendo cellule indesiderate
e tossiche
Rompendo crosslinks extracellulari
Degradando roba extracellulare Quanto
tempo ci vorrebbe?
Funzionerebbe bene sui topi?
Potrebbe essere fatto senza l'IBG?
Potrebbe accellerare il successo negli esseri umani? Referenze
Sommario
Questo memorandum riassume brevemente a grandi linee il caso
per la creazione di un Istituto di Biomedicina Gerontologica ("IBG"), con l'unico scopo di promuovere, coordinare e
sostenere una serie di progetti che congiunti possono condurre ad una cura genuina
dell' invecchiamento umano. Il memorandum e` in due parti. Nella prima sezione,
provvedo a rispondere alle seguenti domande chiave. Quali progetti
principalmente e a quale livello di finanziamento IBG dovrebbe sostenerli IBG? Perche`
questi progetti possono avere successo, fra circa 10 anni? Perche`
questi progetti possono conferire con probabilita` un forte
ringiovanimento nel topo? Perche` un ringiovanimento forte
in 10 anni non e` probabile senza IBG? Perche` un forte
ringiovanimento nel topo e` la strada piu` veloce per curare l'invecchiamento
umano?
La seconda sezione discute in maggior dettaglio i progetti
elencati nel rispondere alla domanda 1 sopra, includendo il loro stato corrente,
fili maggiori sulla ricerca corrente, pietre miliari raggiungilbili
realisticamente nei primi anni di finanziamento e un'
approssimazione sui fondi necessari.
A. Risposte alle domande chiave
1) A quali progetti principali e a quale livello IBG dovrebbe
dare il suo supporto?
I progetti principali che IBG sosterrebbe sono quelli che
hanno un punto finale ben definito su come presentemente
invertire alcuni aspetti irreversibili dell'invecchiamento umano sul topo come
modello;
non dipendono da nessuna scoperta tecnologica drammatica;
Non sono stati adeguatamente finanziati in ogni altro modo;
e sono gia` stati soggetto di esplorazione o
lavoro strettamente simile..
I fondi sarebbero assegnati con un processo standard di peer-revisione,
seguito da quello ben affermato, di pratiche efficienti come quelle della Ellison
Medical Foundation, che e` correntemente, la piu` larga sostenitrice della ricerca, sulla biologia
dell'invecchiamento (ma, sfortunatamente, non la sconfitta dell'invecchiamento).
All'inizio i seguenti soggetti, sarebbero l'argomento per le eventuali
applicazioni: Introduzione
funzionale delle 13 proteine-coding dei geni mitocondriali nel nucleo, rendendo
cosi` le mutazioni mitocondriali inoffensive (de Grey 2000) (Miglioramento
della versatilita` catabolica del lisosoma con enzimi idrolitici non-mammiferi,
rimuovendo gli aggregati non degradabili (de Grey 2002, de Grey et al. 2005) Cancellazione
della capacita` di allungamento di tutti i telomeri, con compenso delle cellule
staminali autologhe recedenti, prevenendo cosi` il cancro (de Grey et al 2004, de Grey 2005) Rimozione/uccisione
di cellule tossiche indesiderate, rimuovendo cosi` la loro tossicita` (de Grey 2006)
Rompendo la proteina-extracellulare
proteina-crosslinks ristabilendo cosi` la matrice biofisica delle loro proprieta` (principalmente
l'elasticita`) (de Grey 2006) Svilluppo di
vaccini che stimolano la rimozione dell'amieloide dal cervello e altri tessuti (de Grey 2006)
Each of these would require total funding in the range of $2m to $15m
per year, spread over at least three and sometimes ~15 research teams.
These teams will typically be working in a university or
other research setting. Applications would also be accepted for
projects that are not included within these themes if a sufficiently
compelling case can be made that they meet the four criteria listed
above. The above topics span six of the seven types of "damage" that
Dr. de Grey has identified as the key intermediates in aging; the one
not listed here is cell loss, whose rectification by stem cell and
growth factor therapies is the subject of sufficient existing work
worldwide that there is presently little case for participation by the
IBG.
Further, IBG would conduct intramural work (that is, within a physical
Institute building) to integrate the results of the above projects so
that they work well together within the same organism, typically mice.
This work is likely to be mainly intramural, in contrast to the work
on the component projects,
Finally, IBG would organise and sponsor conferences dedicated to
the field of biomedical gerontology. These would include focused,
invitation-only roundtable workshops with only ten or so participants,
standard academic meetings covering the broad range of the field, and
public meetings designed to communicate IBG's work to the layman.
Total outlay on such meetings would be at most $0.5m per year.
2) Why are these projects likely to succeed within about 10 years?
This expected timeframe derives directly from the criteria listed in
the last section. With (a) a substantial body of groundwork and (b)
a defined plan of action that has no clearly severe obstacles, the only
things that can stretch such a timeframe are unavailability of funds,
unavailability of experts interested in doing the work, or unforeseen
technical hurdles. The existence of IBG and of applicants for its
funds would remove the first two possibilities; the third can never be
ruled out entirely, but is made unlikely by the fact that specialists
have been sufficiently confident to make the investment in groundwork.
Since all these projects already have the detailed structure typical
of a commercial R&D project (and atypical of a basic science topic),
interim milestones and timelines can readily be specified down to the
level of annual or biennial subgoals. IBG would typically commit to a basal
level of funding of a given project for at least five years up-front,
but this would be subject to large supplementation (typically doubling
of an annual budget) on successful achievement of specified milestones.
This would provide the correct balance between security (so that high
risk but aggressive approaches to the given problem can be pursued)
and incentive to achieve progress as speedily as possible.
3) Why are these projects likely to confer robust mouse rejuvenation?
First we must define "robust mouse rejuvenation". For present purposes
it will be defined as a treatment applied to a mouse only after it has
reached 2/3 of its life expectancy, and which increases its total
healthy life expectancy by at least 2/3. (This equates to trebling its
remaining healthy life expectancy.) Also, the mouse must be of
a strain whose life expectancy (in the absence of any treatment) is at
least three years (which is long for a mouse).
These projects are likely to confer robust mouse rejuvenation because,
jointly with a handful of other research areas that are already being
well funded by other means, they reverse all the major deleterious molecular
and cellular differences between a middle-aged adult and a young adult.
Dr. de Grey has published detailed analyses of this question both in
concert with eminent senior biologists of aging (de Grey et al. 2002a,
2002b) and alone (de Grey 2003). Briefly, there are only seven
categories of such change that are not already amenable to effective
medical intervention; five of these are addressed by the projects
listed earlier and discussed in the second section of this memorandum,
and the other two (cell loss and accumulation of
extracellular aggregates) are being pursued by relatively well-funded
groups. All aspects of age-related decline are the eventual result of
one or more of these changes, so if they were all reversed (either
periodically or continuously) and thus did not accumulate with time,
aging as we now know it would not occur. It would eventually (at an
older age) re-emerge as a result of slower accumulation of other
changes that do not cause pathology in what we now consider a normal
lifetime; it will be possible to address such changes only when they
can be identified, due to having been unmasked by the removal of the
changes we already know about. However, the degree of life extension
defined as "robust mouse rejuvenation" above will be achieved without
solving such "second-generation" problems.
4) Why is robust mouse rejuvenation in 10 years unlikely without IBG?
At present, no organisation is supporting work of the sort described
above, except where it can be packaged as having applications outside
life extension. Moreover, when such funding is available it is always
targeted at the most modest, short-term projects and/or those with a
"basic science" purpose, i.e. directed at improving our understanding
of some aspect of biology as opposed to our manipulation of it. At the
opposite end of the spectrum is work on what we now think of as "anti-
aging medicine", namely supplements and other interventions aimed at
a very modest extension of life expectancy. The projects on which
IBG would focus fall between these two stools: too ambitious-sounding
to be medically respectable but too goal-directed to be biologically
respectable. Thus, without a source of funding whose specific remit
is to fill this vacuum, this work is likely to be delayed by up to a
decade. That translates into a prediction of roughly half a billion
people dying of old age without IBG but not if it were set up now.
Moreover, IBG would, as principal funder of all these projects, be in
a strong position to facilitate and accelerate their co-operation and
thus the rapid generation of mice benefiting from all projects. This
is much less likely to occur in traditional funding environments.
5) Why is robust mouse rejuvenation the quickest route to curing human aging?
The reason is a combination of science and sociology. The later stages
of developing a true cure for human aging will be funded publicly, as
a result of a vigorous demand from society to develop it as soon as
possible. That demand will arise only when society begins to feel that
curing human aging is foreseeable, in contrast to the present situation
where virtually everyone considers it totally impossible within their
or their children's lifetimes and thus does not agitate for it. Thus,
the quickest route to curing human aging is to achieve results in the
lab that are sufficiently impressive to effect this change in public
attitude. Robust mouse rejuvenation, as defined above, should suffice
to do this and is doable more quickly than any comparably impressive
advance. This is because of the great wealth of knowledge and technical
expertise in mouse manipulation that has been built up over the past
century, together with the mouse's relative similarity to humans (as
compared with fruit flies, for example).
B. Prospective IBG-targeted projects: status and near-term directions
This section briefly outlines the status and next steps of five key
strands of translational research that will form components of robust
mouse rejuvenation. The motivation for pursuing that goal, and hence
these projects, is summarised in the previous section. Funding level
estimates are also given, based on an average cost to the funding
source of $200,000 per full-time researcher per year including salary,
research equipment and supplies.
a) Functional introduction of all 13 mitochondrial protein-coding genes
into the nucleus, so making mitochondrial mutations harmless
Basis: mitochondrial mutations accumulate with age, with the result
that some cells become unable to use oxygen. This happens faster in
shorter-lived species, suggesting that it contributes to aging. Only
13 proteins are susceptible to such mutations; the other 1000 or so
proteins in mitochondria are encoded in nuclear DNA, which is hugely
better protected. Thus, we should introduce copies of the 13 genes
into the nucleus (by gene therapy in humans, but first by much more
established techniques in mice) so that these 13 proteins are present
even if mitochondrial mutations have occurred. This will mean that
cells remain able to use oxygen and therefore healthy and non-toxic.
Origin: First suggested as an anti-aging therapy by Hoeben in 1993.
Usually termed "allotopic expression". The general concept of
introducing mitochondrial genes into the nucleus was first proposed
and implemented (in yeast) by Nagley's group in 1986.
Status: Three of the 13 proteins have been expressed from the nucleus
and shown to work (allowing oxygen utilisation when the mitochondrial
counterpart was mutant). However, this has only been done in cell
culture so far, not in live mice.
Next steps: Several approaches to making all 13 genes work, first in
culture and then in mice, have been proposed, reviewed by (de Grey
2000). A key recent advance has been to clone four of these genes
from green algae, which naturally have them in the nucleus; this
will allow emulation of the tricks that evolution has found to make
them work. However, several of these genes have never been found
in the nucleus of any species, so this may not solve the whole
problem (though it may, because we can apply a solution that exists
for one gene to other genes more easily than evolution can). Two
main alternative approaches exist: modifying the genes with sequences
called "inteins" (see de Grey 2000) and using proteins that do not
pump protons.
Key investigators: At least a dozen laboratories are currently doing
work related to this problem. Most of them and their relevant work
are cited in (de Grey 2000). In all cases, however, the work is
proceeding fitfully as a result of very limited funding. The idea
of allotopic expression as a human therapy is relatively long-term
(might take 5-10 years to get working in mice), and such projects
are not favoured by traditional funding agencies. This situation
has actually become worse in the past year or two since the initial
successes mentioned above, because prior to that it could be argued
that allotopic expression was basic science (finding out why these
proteins are hard to encode in the nucleus) whereas now it is "only"
technology. But this recent history means that there is abundant
appropriate expertise available, which needs only adequate funding
to be remobilised.
Funding level and priorities: The first task is to make all 13 genes
work in cell culture. There are three major approaches to this that
presently seem feasible (see "Next steps" above), each of which is
being pursued by at least one laboratory, but for each of which
several variations exist that would be best pursued in other labs.
Thus, a realistic estimate is that a call for applications would
receive 8-12 applications that strongly merited funding. Each of
these applications would typically be for two to four full-time
researchers for five years, with the goal of making some or all of
the 13 genes work in cell culture. In all cases, the translation of
that success to live mice would be the subject of a further five-year
period of funding at a similar level. Total cost to IBG would be in
the range $5m-$7m per year.
Milestones: Manipulation of mitochondrial DNA has recently improved,
such that it will very soon be possible to engineer mutations in
particular mitochondrial genes while leaving others intact. This
will greatly facilitate work on each of the 13 genes in isolation.
An initial milestone will be to get each gene working in cells in
which it is the only one whose mitochondrial copy is mutant. Some
will be easier than others, and we cannot know which technique will
work best. Milestones would thus be set on a case-by-case basis,
depending on the specifics of the approach being pursued. After a
given gene had been made to work, a key next step would be to make
more than one gene work in the same cell; this may again throw up
unexpected problems but they would be likely to be relatively easy
to solve compared with the initial one-gene problems. By the five
year point, a key goal would be to have all 13 genes working in the
same cell. This clear requirement for collaboration between the
various groups would be reflected in the call for applications, and
also in the organising by IBG of regular meetings and mutual site
visits between the grant holders. Before that point, some groups
will be ready to move to live mice and they must be given maximum
opportunity to do so (such as by large supplementary funding, as
summarised in section A). During that phase the milestones will
be similar: getting one or two genes working in live mice will be
easier and quicker than getting them all working.
b) Enhancement of lysosomal catabolic versatility with non-mammalian
hydrolytic enzymes, so removing undegradable aggregates
Basis: Aggregates accumulate in cells with age, in special compartments
called lysosomes. This happens faster in shorter-lived species,
suggesting that it contributes to aging; also, it is known to cause
several of the most important diseases of aging including dementia
and atherosclerosis. It happens because cells naturally generate or
take up a very wide variety of large molecules that they need to
break down, and even though the cell's machinery for breaking things
down is very sophisticated it is not able to degrade everything. The
lysosome is the machinery of last resort for this degradation: it is
a highly acidified compartment with many powerful enzymes. Anything
that cannot be broken down there is just stored within the lysosome,
because there it cannot do much harm whereas if it were ejected it
would be more toxic. Unfortunately, it still does some harm once
there is too much of it. Thus, we should improve the versatility of
the lysosome by giving it new enzymes that help it break down the most
abundant of the things that it currently cannot. Such enzymes exist
in soil micro-organisms, as reasoned theoretically (if they did not,
these substances would accumulate in the soil) and also established
experimentally (de Grey 2002). The task is thus to find them and
add them to mammalian cells.
Origin: first suggested as an anti-aging therapy by de Grey in 1999
(de Grey 2002). Generally termed "lysosomal enhancement". The
general concept of biotechnological use of soil micro-organisms to
degrade recalcitrant molecules is much older and widely exploited.
Status: Proof of concept has been established (de Grey 2002). A team
of experts in all areas relevant to the application of this scheme to
atherosclerosis has been assembled; atherosclerosis was chosen as a
first target because the evidence that lysosomal aggregates cause it
is more universally accepted than for other targets. However, it is
still a longer-term project than traditional funding bodies favour,
so no funding has been secured as yet. With sufficient funding, the
focus on atherosclerosis would be broadened so that neurodegeneration,
macular degeneration and lipofuscin accumulation would all also be
targeted simultaneously.
Next steps: The project breaks down into the following stages:
1) Isolate micro-organisms that can degrade the target substance;
2) Isolate the genes encoding the enzymes that perform this;
3) Construct lysosome-targeted forms of these genes to assay their
toxicity and efficacy in cell culture;
4) Assay toxicity and efficacy in live mice.
Step 1 is relatively simple and cheap: the technique is to isolate
a crude extract from soil and expose it to the target substance in
the absence of any other material that could support growth. Then,
those organisms that grow into colonies will be specifically the
ones that can degrade the target substance (and thereby extract
energy from it). Steps 2 through 4 are more expensive and laborious
but are not specific to this project: the techniques are very well
established.
Key investigators: These fall into several categories. Experts in the
isolation of degradation-competent strains and in the purification
of the target substance from tissue will be required throughout the
project. Experts in the identification of breakdown products of
target substances will also be vital in identifying the degradation
pathway, so as to help in finding the responsible genes. Lysosomal
targeting experts and those involved in introducing genes into cells
and mice and testing toxicity and efficacy would be involved at a
later stage, typically in year 3 onward. There are
many ideal researchers in all these areas, though none of them have
pursued this application of their speciality.
Funding level and priorities: A call for applications would specify a
range of age-related aggregates whose degradation IBG seeks to fund.
I would expect IBG to receive 8-12 applications that strongly merited
funding, mainly focused on atherosclerosis and neurodegeneration but
with at least one each on macular degeneration and lipofuscin. Each
of these applications would typically be for two to four full-time
researchers for five years, but beginning at two FTEs for the first
two years. Typical applications will be collaborations between labs
with expertise in the specific age-related pathology and those with
expertise in bioremediation. Expertise in lysosomal targeting would
typically be proposed to enter the project in year 3. Bioremediation
and lysosomal targeting groups would generally be in a position to
work with more than one pathology-specific group, but the specifics
of particular enzymes (as regards both their isolation and their
engineering) will limit the scope for avoiding duplication of effort.
However, as with allotopic expression, IBG would work actively to
foster communication and collaboration between initially separate
projects. Total cost to IBG would be in the range $2m-$4m per year
in years 1 and 2 and $5m-$10m per year thereafter, possibly rising
to the order of $15m per year in the last stages when mouse toxicity
and efficacy assays are involved and the various identified enzymes
are combined in the same mouse.
Milestones: These arise from the breakdown into four stages as outlined
above. Isolation of degradation-competent micro-organisms should be
achieved quickly; for each target substance, the aim should be to
isolate a dozen strains with high diversity, because many will fail
at subsequent stages (e.g. be toxic). This should be done within
year 1. Isolation of the responsible genes in each such strain will
occupy a further year. There are several mechanisms for lysosomal
targeting, and the choice may vary depending on the enzyme; it is
likely that constructing suitable engineered genes and testing them
for targeting to lysosomes will take a further year, during which
initial work on toxicity will also occur. Assays of efficacy and
translation to live mice will take between one and three more years.
c) Deletion of all telomere elongation capability with compensation by
autologous stem cell reseeding, so preventing cancer
Basis: Cancer, unlike any other aspect of aging, uses natural selection
to become worse with time. All existing or forthcoming anti-cancer
therapies fail to address this key property, because they all have
loopholes that a cancer can escape through by turning genes on or
off. Turning genes on and off by spontaneous mutation is a rather
common event, so there are always some cells in a cancer that have
done it to the right genes to resist the therapy; they thus survive
and take over the cancer, so after a possible period of shrinkage the
cancer returns to its original potency but with total resistance to
the therapy. A way to avoid this is to delete genes that the cancer
cell needs to divide. They cannot be reliably deleted only from the
cancer, however; they must therefore be pre-emptively deleted from
all cells in the organism. But this has the effect of damaging
other, normal tissues that also need to divide, like skin and blood.
However, if the genes chosen are those for telomere elongation, the
cancer (which must divide hundreds of times before it can become
dangerous) will be stopped from growing to a pathological size but
all normal tissues should be able to keep going for about a decade.
Then, they can be "reseeded" once per decade with stem cells that
have been engineered to have normal length telomeres (and hence to
have a replicative lifetime of about a decade), which will support
the tissue after the old cells have lost the ability to divide any
more. Moreover, these new cells can also be engineered to be
chemoresistant, so that any cancer that arises from natural cells
(that can maintain telomeres indefinitely) can be treated with
higher-dose chemotherapy than is possible now.
Origin: First suggested as an anti-aging therapy by de Grey in 2000
(de Grey et al. 2002a, 2004). Termed "whole-body interdiction of
lengthening of telomeres" (WILT). All component technologies (stem
cell reseeding, deletion of genes, engineering chemoresistance) are
already established in mice, and some of them in humans.
Status: This therapy is a new idea and has not been tested directly.
However, the logic underlying both its potential efficacy and the
relative non-efficacy of anything else appears to be solid. This
issue was explored in depth at a roundtable
conference in Cambridge in 2002, at which world leaders in all
the relevant fields gave detailed scrutiny to the therapy's
feasibility on a 10-20 year timescale in humans (and on a 7-10 year
timescale in mice). The participants are the coauthors of (de Grey
et al 2004).
Next steps: Unlike allotopic expression and lysosomal enhancement,
this project will initially comprise several more-or-less separate
strands whose interim progress will not be of direct relevance to
each other. These are (detailed in de Grey et al 2004):
- identifying the genes underlying ALT ("alternative lengthening
of telomeres");
- improving the redifferentiation of adult stem cells into stem
cells of various tissues;
- developing techniques to extend telomeres of cells that have had
their telomerase genes deleted;
- improving the removal of endogenous stem cells to make way for
engineered ones;
- constructing protocols for reliable selection of cells that have
had their telomerase and ALT genes deleted but have not had any
other adventitious genetic alteration;
- improving gene targeting (disruption of an endogenous gene) in
live mice;
- improving the longevity of bone marrow transplants;
- refining the reseeding of gut stem cells;
- improving the regeneration of skin from stem cells.
Key investigators: In each of the relevant areas there are several
groups with the necessary expertise, and most of them are already
focused on the relevance of telomere maintenance to cancer. Thus,
not all aspects of the project will necessarily fulfil the IBG
funding criterion of poor fundability from existing sources. The
main components of WILT that clearly do warrant IBG funding are:
1) identifying the genes underlying ALT;
2) improving oligonucleotide-mediated gene targeting in live mice;
3) refining the reseeding of gut stem cells
and others may need to be added to this list if their success in
attracting adequate funding elsewhere falters.
Funding level and priorities: A call for applications would mention
all the specific aspects of WILT listed above, not only the three
most clearly in need of funding. This is for two reasons: first,
some others may be more in need of better-targeted funding than is
yet apparent, and second, there is a clear need for co-ordination
between all strands of the project, irrespective of the extent to
which IBG was funding them. Funds might thus be targeted towards
simultaneous administration of multiple therapies (bone marrow
transplant and gut reseeding, for example, or skin regeneration in
a telomerase-negative mouse). Hence, the anticipated funding level
for this project as a whole is more dependent than the others on
exactly what applications are received. It will be in the range
$2m to $10m per year, but a more precise estimate cannot be given.
Milestones: Unlike most of the projects discussed in this document,
progress in most of the areas comprising WILT will be incremental.
With the exception of identifying the genes underlying ALT, all
component technologies already exist; the need is for them to be
improved in efficiency and safety so that they can be combined.
Thus, milestones will consist of quantitative improvements. The
ten-year goal is a mouse that never develops advanced cancers,
even in the absence of treatments that are known to work well in
mice but not so well in humans (such as inhibiting angiogenesis),
has short enough telomeres that highly proliferative tissues are
compromised at young adulthood, and is effectively protected from
this problem by stem cell reseeding. The reseeding technology can
be developed in telomerase-negative mice, which are a model of WILT
that has some imperfections (such as retention of ALT) but do show
pathology of highly proliferative tissues; the goal is steadily to
increase the age at which such pathology appears. Improvements in
the efficiency of gene targeting, by contrast, can be developed
just as effectively in normal mice as in telomerase-negative ones.
Milestones should be set realistically but ambitiously, as a year-
on-year improvement in measures such as these which exceeds recent
rates of progress by a factor of about two. This would give a good
chance of implementing full WILT in mice within ten years.
d) Removal/killing of unwanted, toxic cells
Basis: Cells of various types occasionally change, in the body, into
a state called "senescence" which is similar to that seen in cell
culture after large numbers of divisions (though this may not be how
it normally arises in the body). Such cells are identified by the
expression of a different pattern of genes than normal. Some of
the proteins that become overexpressed in senescent cells are
secreted from the cell and act as growth signals to other cells.
Thus, it is possible that senescent cells, even though they cannot
themselves divide, help nearby cells to divide -- including ones
that are precancerous. Other secreted chemicals may be toxic in
other ways. Thus, it is potentially valuable to kill these cells.
Note that the same general strategy is likely also to be effective in
removing visceral fat (fat cells in the abdominal cavity), which have
been shown to be a principal cause of insulin resistance leading to
type II diabetes, and removing clonally expanded but inactive white
blood cells, which inhibit the proliferation of active ones and thus
impair immune response.
Origin: First suggested as an anti-aging therapy by Campisi in 1995
(de Grey et al. 2002a). Also pursued by Barzilai's group for fat
and Pawelec's group for white blood cells.
Status: Research is proceeding on this in the above labs, but at
a grossly inadequate level of funding. There are two potential
approaches: to incorporate an inducible "suicide gene" into cells
which is activated if and when the cell becomes senescent, or to
target cell-killing signals to senescent cells via cell-surface
markers diagnostic of the senescent state. The former approach
is technically simpler in mice but less promising in some ways:
for example, cells that undergo silencing of the suicide gene are
permanently un-killable. The latter method is more comprehensive
-- but only if appropriate cell surface markers can be found that
provide adequately accurate selectivity (killing of most senescent
cells without killing many non-senescent ones).
Next steps: "Just do it". This is a much simpler project than any
of those discussed above and simply needs adequate resources in
the hands of suitable expert investigators.
Key investigators: Drs. Campisi, Barzilai and Pawelec are the main
investigators presently pursuing this approach in their respective
cell types. Dr. Campisi is focusing on the cell suicide
option. This is a technique that has been used in many other
research contexts in recent years and several other labs would be
in just as strong a position to use it here. The other approach
would be an appropriate project for immunologists, since the immune
system kills foreign cells (and cancerous cells) in just this way.
Funding level and priorities: Both the above lines of attack should
be pursued with at least four to eight full-time researchers each,
in at least five laboratories each to account for the differences
in approach indicated with different cell types. This equates to
a total cost to IBG of $5m-8m per year.
Milestones: This project should be complete too soon to need interim
milestones. It should take only three to five years with adequate
funding. However, an aspect that is as yet unknown is whether some
cell types will be harder to kill when senescent than others; that
will be revealed by the results achieved in the first couple of years.
e) Breaking extracellular protein-protein crosslinks, so restoring
matrix biophysical properties (mainly elasticity)
Basis: Long-lived extracellular proteins (such as in cartilage) become
progressively linked to each other by chemical reactions, mostly with
sugars. These links make the material less elastic, which in many
cases (such as the artery wall) makes them work less well. Moreover,
this process happens more rapidly in shorter-lived species, suggesting
that it contributes to aging. Since the proteins in question perform
only mechanical/structural roles, rather than catalysing chemical
reactions like enzymes, their function would be restored if the links
were chemically broken, even though there would be side-chains present
that were not native to the proteins.
Origin: Inhibition of cross-link formation was first proposed as an anti-
aging therapy by Cerami and Monnier in 1981 (when breaking of existing
cross-links was presumed impossible). First description of breaking of
cross-links was by Cerami and colleagues in 1996.
Status: The compound discussed in 1996 has been refined slightly to a
form now known as ALT-711. The patent for ALT-711 is held by Alteon,
a small biotech startup. This compound has shown very promising
efficacy in live animals of several species and has undergone phase
I and II clinical trials. However, the underlying chemistry is quite
simple, so big pharma have declined to invest in phase III trials;
it is considered too likely that a clever chemist could develop a
compound not covered by ALT-711's patent but working in the same way.
Only one other report of a cross-link cutter has appeared; that is
in a patent from India and no supporting publications exist. Also,
it is known that ALT-711 only breaks a subset of cross-links.
Next steps: Two important lines of attack are of paramount importance.
First, the chemical nature of the cross-links cut by ALT-711 is still
in dispute because they are also easily broken by the acid treatment
used to extract relevant chemicals from cartilage. Gentler assays
are needed, so that a wider range of the cross-links that accumulate
in vivo can be identified and compounds designed that can cut those
which ALT-711 cannot. Second, it is believed that some cross-links
are chemically too stable to be amenable to chemical cleavage; they
would have to be broken by enzymes that could couple the necessary
energy to an exergonic process such as ATP hydrolysis. We do not
yet know whether these very stable cross-links are present in living
organisms at an abundance that makes it important to cut them, though
recent work has shown that some links of intermediate stability are
indeed abundant.
Key investigators: The field of extracellular cross-links comprises a
dozen or so world-class research groups. Unfortunately, most work
currently in progress is focused on inhibiting the formation of
cross-links rather than on breaking existing ones. This is largely
because the chemistry of inhibition is easier: the original breaker,
the precursor of ALT-711, was found by luck. But all these labs
have the expertise to progress the science of cross-link breakers;
it just needs a change in priorities, which would be achieved by
the availability of targeted funds.
Funding level and priorities: Both lines of research noted above must
be pursued, and ALT-711 itself must not be allowed to languish in
its present poorly-supported state on account of the patent situation.
Research on better extraction methods merits the attention of three
to five labs, each with two to four full-time researchers, so the
total cost to IBG would approximate $2m-$3m per year. Work on the
enzymatic cleavage of abundant, known, highly stable cross-links is
potentially an offshoot of lysosomal enhancement, but the approach
described there is unlikely to work, because the cross-links are a
very small part of the material and also are not energy-rich. This
therefore constitutes a more basic research project than anything
discussed elsewhere in this document and any IBG funding would be
subject to the provision of a more concrete project plan than any
known to me. Funding is thus impossible to estimate but may be
zero, at least in the short term. Support for ALT-711 may include
support for phase III clinical trials, but a more effective method
may be to fund a wider variety of phase II trials than have so far
occurred, so as to establish its broad-range biomedical efficacy.
This should cost $5m-$15m per year.
Milestones: Improvement in extraction methods to allow more faithful
identification of cross-links is an incremental process, so the
most appropriate milestones will be in terms of rate of progress
in identifying new cross-link species or in improving the accuracy
with which their abundance in tissue can be determined. (The latter
is a key prerequisite for determining the effectiveness of any
cross-link breaker.) These should be set year-on-year, set as twice
the recent rate of progress, and with the offer of large
supplementary funding in the event of success.
f) Stimulation of the immune system to engulf and degrade amyloid
Basis: In various organs, proteins accumulate in the spaces between cells
in fibrous structures called "amyloid" that resist degradation. Amyloid
is a major hallmark of Alzheimer's disease and is also seen frequently in
the pancreas in diabetics and in the heart in elderly people generally.
In each case, though a different protein forms the major constituent, the
deposits are likely to be harmful (though the mechanism of this toxicity
is generally not known for sure). The machinery inside cells is much more
powerful at breaking things down than anything that operates outside cells,
so if cells can be induced to engulf this material then they may be able
to break it down. Cells of the immune system often work by engulfing the
bacteria (or infected cells) that they are stimulated agaiinst, so they
are the natural type of cell to try to stimulate in this way. Stimulation
of the immune system against a particular substance is simply vaccination.
Origin: First explored by Schenk's group at Elan Pharmaceuticals during
the late 1990s, with initial work in mice published in 1999.
Status: Following the spectacular initial results in mice, which focused
on a mouse model of Alzheimer's disease, Elan and collaborators moved
rapidly to clinical trials. The first trial had to be aborted because
6% of patients suffered complications. However, these complications
are now thought to be understood and ways to avoid them are apparent,
so second-generation clinical trials are already underway. No such work
has yet been attempted against amyloid in other organs, however, even
in mouse models.
Next steps: The main next step is to develop immunisation approaches for
the non-brain amyloids. The work on the brain is going well enough and
is well enough funded that there is currently little reason for the IBG
to supplement it.
Key investigators: Elan and their coworkers are the spearhead for the
brain amyloid work. For each other affected organ there are a few
groups working on methods to inhibit formation but no one working on
removal. Thus, this is a good case where the IBG can take a lead in
forming new academic collaborations to hasten the application of the
brain amyloid immunisation techniques to other tissues.
Funding level and priorities: The development of antibodies ("passive
vaccination") against brain amyloid, the preferred approach for the new
clinical trials, has not been a slow process, so there is reason to be
optimistic that a similar procedure can be developed quickly in other
tissues. However, since this work has not yet begun, the timeframe for
completion in mouse models may be 4-7 years even with good funding. A
minimum of two teanms should be working on each relevant amyloid, so if
brain amyloid is excluded the ideal would be 4-5 teams, each with four
to seven full-time researchers, so the total cost to IBG would approximate
$5m per year.
Milestones: The development of antibodies that do not cause
inflammation by attacking the un-aggregated (monomeric) form of the
amyloidogenic protein is the first milestone. Once those exist, safety
and then efficacy in mice can be evaluated routinely.
C. References
All my published work is available in preprint form on my publications page. The ones referenced above
are as follows:
de Grey 2000: Mitochondrial gene therapy: an arena for the biomedical use
of inteins. Trends Biotechnol 2000; 18(9):394-399. PDF
de Grey 2002: Bioremediation meets biomedicine: therapeutic translation
of microbial catabolism to the lysosome. Trends Biotechnol 2002; 20(11):
452-455. PDF
de Grey et al. 2002a: de Grey ADNJ, Ames BN, Anderson JK, Bartke A,
Campisi J, Heward CB, McCarter RJM, Stock G. Time to talk SENS:
critiquing the immutability of human aging. Annals NY Acad
Sci 2002; 959:452-462. PDF
de Grey et al. 2002b: de Grey ADNJ, Baynes JW, Berd D, Heward CB,
Pawelec G, Stock G. Is human aging still mysterious enough to be
left only to scientists? BioEssays
2002; 24(7):667-676. PDF
de Grey 2003: An engineer's approach to the development of real anti-aging
medicine. Science's SAGE KE 2003;
http://sageke.sciencemag.org/cgi/content/full/sageke;2003/1/vp1
Also In: The Fountain of Youth: Ethical, Religious, and Existential
Perspectives on a Biomedical Goal (S.G. Post, ed.), Oxford University
Press, 2004, pp. 249-267. PDF
de Grey et al. 2004: de Grey ADNJ, Campbell FC, Dokal I,
Fairbairn LJ, Graham GJ, Jahoda CAB, Porter ACG. Total
deletion of in vivo telomere elongation capacity: an ambitious but
possibly ultimate cure for all age-related human cancers. Annals
NY Acad Sci 2004; 1019:147-170. PDF
de Grey et al. 2005: de Grey ADNJ, Alvarez PJJ, Brady RO, Cuervo AM, Jerome WG, McCarty PL, Nixon RA, Rittmann BE, Sparrow JR. Medical bioremediation: prospects for the application of microbial catabolic diversity to aging and several major age-related diseases. Ageing Res Rev 2005; 4(3):315-338. PDF
de Grey 2005: Whole-body interdiction of lengthening of telomeres: a proposal for cancer prevention. Front Biosci 2005; 10:2420-2429. PDF
de Grey 2006: Foreseeable pharmaceutical repair of age-related extracellular damage. Current Drug Targets, in press.PDF
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